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BMCBI
2010
156views more  BMCBI 2010»
14 years 12 months ago
Protein complex prediction via verifying and reconstructing the topology of domain-domain interactions
Background: High-throughput methods for detecting protein-protein interactions enable us to obtain large interaction networks, and also allow us to computationally identify the as...
Yosuke Ozawa, Rintaro Saito, Shigeo Fujimori, Hisa...
CONSTRAINTS
2010
126views more  CONSTRAINTS 2010»
14 years 12 months ago
Lexicographically-ordered constraint satisfaction problems
Abstract. We describe a simple CSP formalism for handling multi-attribute preference problems with hard constraints, one that combines hard constraints and preferences so the two a...
Eugene C. Freuder, Robert Heffernan, Richard J. Wa...
BMCBI
2006
153views more  BMCBI 2006»
14 years 12 months ago
The 3of5 web application for complex and comprehensive pattern matching in protein sequences
Background: The identification of patterns in biological sequences is a key challenge in genome analysis and in proteomics. Frequently such patterns are complex and highly variabl...
Markus Seiler, Alexander Mehrle, Annemarie Poustka...
JSAC
2007
59views more  JSAC 2007»
14 years 11 months ago
On scheduling of peer-to-peer video services
Abstract— Peer-to-peer (P2P) video systems provide a costeffective way for a large number of hosts to colloaborate for video sharing. Two features characterize such a system: 1) ...
Ying Cai, Ashwin Natarajan, Johnny Wong
BMCBI
2011
14 years 3 months ago
The Proteogenomic Mapping Tool
Background: High-throughput mass spectrometry (MS) proteomics data is increasingly being used to complement traditional structural genome annotation methods. To keep pace with the...
William S. Sanders, Nan Wang, Susan M. Bridges, Br...