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» Improving EAs for Sequencing Problems
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BMCBI
2005
111views more  BMCBI 2005»
14 years 11 months ago
Improving interoperability between microbial information and sequence databases
Background: Biological resources are essential tools for biomedical research. Their availability is promoted through on-line catalogues. Common Access to Biological Resources and ...
Paolo Romano, Peter Dawyndt, Francesca Piersigilli...
GECCO
2010
Springer
176views Optimization» more  GECCO 2010»
15 years 1 months ago
A hierarchical cooperative evolutionary algorithm
To successfully search multiple coadaptive subcomponents in a solution, we developed a novel cooperative evolutionary algorithm based on a new computational multilevel selection f...
Shelly Xiaonan Wu, Wolfgang Banzhaf
BMCBI
2007
144views more  BMCBI 2007»
14 years 11 months ago
Motif kernel generated by genetic programming improves remote homology and fold detection
Background: Protein remote homology detection is a central problem in computational biology. Most recent methods train support vector machines to discriminate between related and ...
Tony Håndstad, Arne J. H. Hestnes, Pål...
AI
2003
Springer
15 years 5 months ago
An Improved Ant Colony Optimisation Algorithm for the 2D HP Protein Folding Problem
The prediction of a protein’s structure from its amino-acid sequence is one of the most important problems in computational biology. In the current focus on a widely studied abst...
Alena Shmygelska, Holger H. Hoos
BIBM
2008
IEEE
142views Bioinformatics» more  BIBM 2008»
15 years 6 months ago
Using Global Sequence Similarity to Enhance Biological Sequence Labeling
Identifying functionally important sites from biological sequences, formulated as a biological sequence labeling problem, has broad applications ranging from rational drug design ...
Cornelia Caragea, Jivko Sinapov, Drena Dobbs, Vasa...