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BICOB
2009
Springer
15 years 4 months ago
A Bayesian Approach to High-Throughput Biological Model Generation
Abstract. With the availability of hundreds and soon-to-be thousands of complete genomes, the construction of genome-scale metabolic models for these organisms has attracted much a...
Xinghua Shi, Rick L. Stevens
71
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WABI
2009
Springer
117views Bioinformatics» more  WABI 2009»
15 years 4 months ago
A Simulation Study Comparing Supertree and Combined Analysis Methods Using SMIDGen
Background: Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined...
M. Shel Swenson, François Barbançon,...
CIKM
2009
Springer
15 years 4 months ago
A social recommendation framework based on multi-scale continuous conditional random fields
This paper addresses the issue of social recommendation based on collaborative filtering (CF) algorithms. Social recommendation emphasizes utilizing various attributes informatio...
Xin Xin, Irwin King, Hongbo Deng, Michael R. Lyu
CIKM
2009
Springer
15 years 4 months ago
Mining linguistic cues for query expansion: applications to drug interaction search
Given a drug under development, what are other drugs or biochemical compounds that it might interact with? Early answers to this question, by mining the literature, are valuable f...
Sheng Guo, Naren Ramakrishnan
IWMM
2009
Springer
152views Hardware» more  IWMM 2009»
15 years 4 months ago
A new approach to parallelising tracing algorithms
Tracing algorithms visit reachable nodes in a graph and are central to activities such as garbage collection, marshalling etc. Traditional sequential algorithms use a worklist, re...
Cosmin E. Oancea, Alan Mycroft, Stephen M. Watt