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BMCBI
2002
101views more  BMCBI 2002»
14 years 9 months ago
Total sequence decomposition distinguishes functional modules, "molegos" in apurinic/apyrimidinic endonucleases
Background: Total sequence decomposition, using the web-based MASIA tool, identifies areas of conservation in aligned protein sequences. By structurally annotating these motifs, t...
Catherine H. Schein, Numan Özgün, Tadahi...
BMCBI
2002
133views more  BMCBI 2002»
14 years 9 months ago
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
Kevin Truong, Mitsuhiko Ikura
CORR
2002
Springer
156views Education» more  CORR 2002»
14 years 9 months ago
Mapping the Gnutella Network: Properties of Large-Scale Peer-to-Peer Systems and Implications for System Design
Despite recent excitement generated by the peer-to-peer (P2P) paradigm and the surprisingly rapid deployment of some P2P applications, there are few quantitative evaluations of P2...
Matei Ripeanu, Ian T. Foster, Adriana Iamnitchi
ALGORITHMICA
1998
143views more  ALGORITHMICA 1998»
14 years 9 months ago
On Minimum-Area Hulls
Abstract. We study some minimum-area hull problems that generalize the notion of convex hull to starshaped and monotone hulls. Specifically, we consider the minimum-area star-shap...
Esther M. Arkin, Yi-Jen Chiang, Martin Held, Josep...
SIAMCOMP
1998
117views more  SIAMCOMP 1998»
14 years 9 months ago
The Queue-Read Queue-Write PRAM Model: Accounting for Contention in Parallel Algorithms
This paper introduces the queue-read, queue-write (qrqw) parallel random access machine (pram) model, which permits concurrent reading and writing to shared memory locations, but ...
Phillip B. Gibbons, Yossi Matias, Vijaya Ramachand...