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BMCBI
2006
139views more  BMCBI 2006»
15 years 5 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
SPAA
1996
ACM
15 years 9 months ago
From AAPC Algorithms to High Performance Permutation Routing and Sorting
Several recent papers have proposed or analyzed optimal algorithms to route all-to-all personalizedcommunication (AAPC) over communication networks such as meshes, hypercubes and ...
Thomas Stricker, Jonathan C. Hardwick
FCCM
2007
IEEE
117views VLSI» more  FCCM 2007»
15 years 11 months ago
FPGA Acceleration of Gene Rearrangement Analysis
In this paper we present our work toward FPGA acceleration of phylogenetic reconstruction, a type of analysis that is commonly performed in the fields of systematic biology and co...
Jason D. Bakos
LREC
2010
174views Education» more  LREC 2010»
15 years 6 months ago
SINotas: the Evaluation of a NLG Application
SINotas is a data-to-text NLG application intended to produce short textual reports on students'academic performance from a database conveying their grades, weekly attendance...
Roberto P. A. Araujo, Rafael L. de Oliveira, Eder ...
WWW
2007
ACM
16 years 5 months ago
Mining contiguous sequential patterns from web logs
Finding Contiguous Sequential Patterns (CSP) is an important problem in Web usage mining. In this paper we propose a new data structure, UpDown Tree, for CSP mining. An UpDown Tre...
Jinlin Chen, Terry Cook