We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Next generation tiled microarchitectures are going to be limited by off-chip misses and by on-chip network usage. Furthermore, these platforms will run an heterogeneous mix of ap...
In contrast to the common belief that OpenMP requires data-parallel extensions to scale well on architectures with non-uniform memory access latency, recent work has shown that it ...
This paper presents a technique, adaptive replication, for automatically eliminating synchronization bottlenecks in multithreaded programs that perform atomic operations on object...
This paper presents a fully automated segmentation method for medical images. The goal is to localize and parameterize a variety of types of structure in these images for subsequen...