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BIBM
2010
IEEE
158views Bioinformatics» more  BIBM 2010»
14 years 7 months ago
Protein-protein interaction prediction via Collective Matrix Factorization
Abstract--Protein-protein interactions (PPI) play an important role in cellular processes and metabolic processes within a cell. An important task is to determine the existence of ...
Qian Xu, Evan Wei Xiang, Qiang Yang
RTAS
2010
IEEE
14 years 8 months ago
DARTS: Techniques and Tools for Predictably Fast Memory Using Integrated Data Allocation and Real-Time Task Scheduling
—Hardware-managed caches introduce large amounts of timing variability, complicating real-time system design. One alternative is a memory system with scratchpad memories which im...
Sangyeol Kang, Alexander G. Dean
BIBM
2008
IEEE
212views Bioinformatics» more  BIBM 2008»
15 years 4 months ago
Analysis of Multiplex Gene Expression Maps Obtained by Voxelation
Background: Gene expression signatures in the mammalian brain hold the key to understanding neural development and neurological disease. Researchers have previously used voxelatio...
Li An, Hongbo Xie, Mark H. Chin, Zoran Obradovic, ...
BMCBI
2006
123views more  BMCBI 2006»
14 years 9 months ago
Computational models with thermodynamic and composition features improve siRNA design
Background: Small interfering RNAs (siRNAs) have become an important tool in cell and molecular biology. Reliable design of siRNA molecules is essential for the needs of large fun...
Svetlana A. Shabalina, Alexey N. Spiridonov, Aleks...
FPGA
2006
ACM
224views FPGA» more  FPGA 2006»
15 years 1 months ago
Flexible implementation of genetic algorithms on FPGAs
In this paper, we propose a technique to flexibly implement genetic algorithms for various problems on FPGAs. For the purpose, we propose a basic architecture for GA which consist...
Tatsuhiro Tachibana, Yoshihiro Murata, Naoki Shiba...