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GCB
2003
Springer
164views Biometrics» more  GCB 2003»
15 years 2 months ago
Integrative machine learning approach for multi-class SCOP protein fold classification
: Classification and prediction of protein structure has been a central research theme in structural bioinformatics. Due to the imbalanced distribution of proteins over multi SCOP ...
Aik Choon Tan, David Gilbert, Yves Deville
BMCBI
2008
123views more  BMCBI 2008»
14 years 9 months ago
A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences
Background: The structure of many eukaryotic cell regulatory proteins is highly modular. They are assembled from globular domains, segments of natively disordered polypeptides and...
Claudia Chica, Alberto Labarga, Cathryn M. Gould, ...
BMCBI
2006
166views more  BMCBI 2006»
14 years 9 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
PAKDD
2005
ACM
160views Data Mining» more  PAKDD 2005»
15 years 3 months ago
Improving Mining Quality by Exploiting Data Dependency
The usefulness of the results produced by data mining methods can be critically impaired by several factors such as (1) low quality of data, including errors due to contamination, ...
Fang Chu, Yizhou Wang, Carlo Zaniolo, Douglas Stot...
BMCBI
2008
173views more  BMCBI 2008»
14 years 9 months ago
Improved machine learning method for analysis of gas phase chemistry of peptides
Background: Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS) o...
Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Nat...