Abstract. Multi-Point Constructive Search maintains a small set of “elite solutions” that are used to heuristically guide constructive search through periodically restarting se...
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
The hypergraph matching problem is to find a largest collection of disjoint hyperedges in a hypergraph. This is a well-studied problem in combinatorial optimization and graph theo...
In recent years, the development of multi-objective evolutionary algorithms (MOEAs) hybridized with mathematical programming techniques has significantly increased. However, most...
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...