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BMCBI
2005
152views more  BMCBI 2005»
14 years 9 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
RECOMB
2006
Springer
15 years 9 months ago
A Parsimony Approach to Genome-Wide Ortholog Assignment
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving various...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
IUI
2009
ACM
15 years 6 months ago
What were you thinking?: filling in missing dataflow through inference in learning from demonstration
Recent years have seen a resurgence of interest in programming by demonstration. As end users have become increasingly sophisticated, computer and artificial intelligence technolo...
Melinda T. Gervasio, Janet L. Murdock
84
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CEC
2010
IEEE
14 years 10 months ago
Linear antenna array synthesis using fitness-adaptive differential evolution algorithm
-- Design of non-uniform linear antenna arrays is one of the most important electromagnetic optimization problems of current interest. In this article, an adaptive Differential Evo...
Aritra Chowdhury, Ritwik Giri, Arnob Ghosh, Swagat...
BMCBI
2008
152views more  BMCBI 2008»
14 years 9 months ago
Predicting biological system objectives de novo from internal state measurements
Background: Optimization theory has been applied to complex biological systems to interrogate network properties and develop and refine metabolic engineering strategies. For examp...
Erwin P. Gianchandani, Matthew A. Oberhardt, Antho...