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» Increasing Concurrency in Databases Using Program Analysis
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106
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BMCBI
2004
98views more  BMCBI 2004»
15 years 2 months ago
Incidence of "quasi-ditags" in catalogs generated by Serial Analysis of Gene Expression (SAGE)
Background: Serial Analysis of Gene Expression (SAGE) is a functional genomic technique that quantitatively analyzes the cellular transcriptome. The analysis of SAGE libraries rel...
Sergey V. Anisimov, Alexei A. Sharov
115
Voted
ADAEUROPE
2007
Springer
15 years 8 months ago
Towards User-Level Extensibility of an Ada Library: An Experiment with Cheddar
In this article, we experiment a way to extend an Ada library called Cheddar. Cheddar provides a domain specific language. Programs written with this domain specific language can...
Frank Singhoff, Alain Plantec
127
Voted
BMCBI
2005
91views more  BMCBI 2005»
15 years 2 months ago
Providing visualisation support for the analysis of anatomy ontology data
Background: Improvements in technology have been accompanied by the generation of large amounts of complex data. This same technology must be harnessed effectively if the knowledg...
Aba-Sah Dadzie, Albert Burger
146
Voted
BMCBI
2006
129views more  BMCBI 2006»
15 years 2 months ago
Fast index based algorithms and software for matching position specific scoring matrices
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
Michael Beckstette, Robert Homann, Robert Giegeric...
142
Voted
BMCBI
2008
155views more  BMCBI 2008»
15 years 2 months ago
ComPath: comparative enzyme analysis and annotation in pathway/subsystem contexts
Background: Once a new genome is sequenced, one of the important questions is to determine the presence and absence of biological pathways. Analysis of biological pathways in a ge...
Kwangmin Choi, Sun Kim