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BMCBI
2010
136views more  BMCBI 2010»
15 years 19 days ago
SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale
Background: An important problem in genomics is the automatic inference of groups of homologous proteins from pairwise sequence similarities. Several approaches have been proposed...
Tamás Nepusz, Rajkumar Sasidharan, Alberto ...
ESA
1998
Springer
162views Algorithms» more  ESA 1998»
15 years 4 months ago
External Memory Algorithms
Abstract. Data sets in large applications are often too massive to t completely inside the computer's internal memory. The resulting input output communication or I O between ...
Jeffrey Scott Vitter
JAR
2006
236views more  JAR 2006»
15 years 14 days ago
Deciding Boolean Algebra with Presburger Arithmetic
We describe an algorithm for deciding the first-order multisorted theory BAPA, which combines 1) Boolean algebras of sets of uninterpreted elements (BA) and 2) Presburger arithmeti...
Viktor Kuncak, Huu Hai Nguyen, Martin C. Rinard
CIVR
2008
Springer
220views Image Analysis» more  CIVR 2008»
15 years 2 months ago
Web-based information content and its application to concept-based video retrieval
Semantic similarity between words or phrases is frequently used to find matching correlations between search queries and documents when straightforward matching of terms fails. Th...
Alexander Haubold, Apostol Natsev
138
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LBM
2007
15 years 1 months ago
Syntactic Features for Protein-Protein Interaction Extraction
Background: Extracting Protein-Protein Interactions (PPI) from research papers is a way of translating information from English to the language used by the databases that store th...
Rune Sætre, Kenji Sagae, Jun-ichi Tsujii