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» Increasing Concurrency in Databases Using Program Analysis
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97
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IEEEHPCS
2010
14 years 11 months ago
CuHMMer: A load-balanced CPU-GPU cooperative bioinformatics application
Abstract—GPUs have recently been used to accelerate dataparallel applications for they provide easier programmability and increased generality while maintaining the tremendous me...
Ping Yao, Hong An, Mu Xu, Gu Liu, Xiaoqiang Li, Ya...
124
Voted
BMCBI
2007
148views more  BMCBI 2007»
15 years 14 days ago
Blast sampling for structural and functional analyses
Background: The post-genomic era is characterised by a torrent of biological information flooding the public databases. As a direct consequence, similarity searches starting with ...
Anne Friedrich, Raymond Ripp, Nicolas Garnier, Emm...
BMCBI
2007
120views more  BMCBI 2007»
15 years 17 days ago
Recognition of interferon-inducible sites, promoters, and enhancers
Background: Computational analysis of gene regulatory regions is important for prediction of functions of many uncharacterized genes. With this in mind, search of the target genes...
Elena A. Ananko, Yury V. Kondrakhin, Tatyana I. Me...
131
Voted
ICDE
2010
IEEE
251views Database» more  ICDE 2010»
16 years 6 days ago
Viewing a World of Annotations through AnnoVIP
The proliferation of electronic content has notably lead to the apparition of large corpora of interrelated structured documents (such as HTML and XML Web pages) and semantic annot...
Konstantinos Karanasos, Spyros Zoupanos
SIGMOD
2012
ACM
203views Database» more  SIGMOD 2012»
13 years 2 months ago
Optimizing index for taxonomy keyword search
Query substitution is an important problem in information retrieval. Much work focuses on how to find substitutes for any given query. In this paper, we study how to efficiently ...
Bolin Ding, Haixun Wang, Ruoming Jin, Jiawei Han, ...