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BMCBI
2008
124views more  BMCBI 2008»
14 years 12 months ago
RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays
Background: Reverse Phase Protein Arrays (RPPA) are convenient assay platforms to investigate the presence of biomarkers in tissue lysates. As with other high-throughput technolog...
Romesh Stanislaus, Mark Carey, Helena F. Deus, Kev...
BMCBI
2008
211views more  BMCBI 2008»
14 years 12 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
BMCBI
2008
140views more  BMCBI 2008»
14 years 12 months ago
GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations
Background: The most renowned biological ontology, Gene Ontology (GO) is widely used for annotations of genes and gene products of different organisms. However, there are shortcom...
Qingwei Xu, Yixiang Shi, Qiang Lu, Guo-qing Zhang,...
CERA
2010
105views more  CERA 2010»
14 years 12 months ago
Implications of Alternative Multilevel Design Methods for Design Process Management
Multilevel design problems are typically decomposed into a hierarchy of distributed and strongly coupled sub-problems, each solved by design teams with specialized knowledge and t...
David Shahan, Carolyn Seepersad Seepersad
CCR
2008
101views more  CCR 2008»
14 years 12 months ago
Empirical evaluation of hash functions for multipoint measurements
A broad spectrum of network measurement applications demand passive multipoint measurements in which data from multiple observation points has to be correlated. Examples are the p...
Christian Henke, Carsten Schmoll, Tanja Zseby
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