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» Indexing and Searching a Mass Spectrometry Database
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BMCBI
2006
153views more  BMCBI 2006»
13 years 6 months ago
2DDB - a bioinformatics solution for analysis of quantitative proteomics data
Background: We present 2DDB, a bioinformatics solution for storage, integration and analysis of quantitative proteomics data. As the data complexity and the rate with which it is ...
Lars Malmström, György Marko-Varga, Guni...
BMCBI
2010
117views more  BMCBI 2010»
13 years 6 months ago
Better score function for peptide identification with ETD MS/MS spectra
Background: Tandem mass spectrometry (MS/MS) has become the primary way for protein identification in proteomics. A good score function for measuring the match quality between a p...
Xiaowen Liu, Baozhen Shan, Lei Xin, Bin Ma
DEXAW
2008
IEEE
183views Database» more  DEXAW 2008»
14 years 25 days ago
Audio-Visual Content Analysis in P2P Networks: The SAPIR Approach
Content based search in audio-visual collections requires media specific analysis for extracting low level features to be efficiently indexed and searched. We present the SAPIR ...
Walter Allasia, Fabrizio Falchi, Francesco Gallo, ...
BMCBI
2007
99views more  BMCBI 2007»
13 years 6 months ago
The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data
Background: The combination of mass spectrometry and solution phase amide hydrogen/deuterium exchange (H/D exchange) experiments is an effective method for characterizing protein ...
B. D. Pascal, M. J. Chalmers, S. A. Busby, C. C. M...
BMCBI
2007
157views more  BMCBI 2007»
13 years 6 months ago
Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational
Background: High-throughput peptide and protein identification technologies have benefited tremendously from strategies based on tandem mass spectrometry (MS/MS) in combination wi...
Nico Pfeifer, Andreas Leinenbach, Christian G. Hub...