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JEA
2008
97views more  JEA 2008»
15 years 3 months ago
Approximating the true evolutionary distance between two genomes
As more and more genomes are sequenced, evolutionary biologists are becoming increasingly interested in evolution at the level of whole genomes, in scenarios in which the genome e...
Krister M. Swenson, Mark Marron, Joel V. Earnest-D...
STOC
2006
ACM
129views Algorithms» more  STOC 2006»
16 years 3 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...
135
Voted
GECCO
2006
Springer
164views Optimization» more  GECCO 2006»
15 years 7 months ago
Biobjective evolutionary and heuristic algorithms for intersection of geometric graphs
Wire routing in a VLSI chip often requires minimization of wire-length as well as the number of intersections among multiple nets. Such an optimization problem is computationally ...
Rajeev Kumar, Pramod Kumar Singh, Bhargab B. Bhatt...
135
Voted
GECCO
2007
Springer
159views Optimization» more  GECCO 2007»
15 years 9 months ago
Evolutionary hypernetwork models for aptamer-based cardiovascular disease diagnosis
We present a biology-inspired probabilistic graphical model, called the hypernetwork model, and its application to medical diagnosis of disease. The hypernetwork models are a way ...
JungWoo Ha, Jae-Hong Eom, Sung-Chun Kim, Byoung-Ta...
129
Voted
CEC
2007
IEEE
15 years 9 months ago
Non-separable fitness functions for evolutionary shape optimization benchmarking
—Target shape matching can be used as a quick and easy surrogate task when evaluating optimization algorithms intended for computationally expensive tasks, such as turbine blade ...
Tim A. Yates, Thorsten Schnier