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BMCBI
2005
212views more  BMCBI 2005»
15 years 4 months ago
PAGE: Parametric Analysis of Gene Set Enrichment
Background: Gene set enrichment analysis (GSEA) is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes i...
Seon-Young Kim, David J. Volsky
ICAI
2010
15 years 2 months ago
Exact Loopy Belief Propagation on Euler Graphs
Belief propagation is widely used in inference of graphical models. It yields exact solutions when the underlying graph is singly connected. When the graph contains loops, double-c...
Chen-Hsiang Yeang
PAM
2010
Springer
15 years 11 months ago
Toward Topology Dualism: Improving the Accuracy of AS Annotations for Routers
Abstract. To describe, analyze, and model the topological and structural characteristics of the Internet, researchers use Internet maps constructed at the router or autonomous syst...
Bradley Huffaker, Amogh Dhamdhere, Marina Fomenkov...
AAAI
1998
15 years 6 months ago
OKBC: A Programmatic Foundation for Knowledge Base Interoperability
The technology for building large knowledge bases (KBs) is yet to witness a breakthrough so that a KB can be constructed by the assembly of prefabricated knowledge components. Kno...
Vinay K. Chaudhri, Adam Farquhar, Richard Fikes, P...
BIB
2010
129views more  BIB 2010»
15 years 4 months ago
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
PathwayTools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB). A PGDB such as EcoCyc integrates ...
Peter D. Karp, Suzanne M. Paley, Markus Krummenack...