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» Inferring gene regression networks with model trees
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BMCBI
2010
172views more  BMCBI 2010»
15 years 18 days ago
Inferring gene regression networks with model trees
Background: Novel strategies are required in order to handle the huge amount of data produced by microarray technologies. To infer gene regulatory networks, the first step is to f...
Isabel A. Nepomuceno-Chamorro, Jesús S. Agu...
BMCBI
2007
154views more  BMCBI 2007»
15 years 15 days ago
Inferring biological networks with output kernel trees
Background: Elucidating biological networks between proteins appears nowadays as one of the most important challenges in systems biology. Computational approaches to this problem ...
Pierre Geurts, Nizar Touleimat, Marie Dutreix, Flo...
130
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BMCBI
2007
136views more  BMCBI 2007»
15 years 15 days ago
Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
Xiaoyu Chen, Mathieu Blanchette
BIOINFORMATICS
2006
118views more  BIOINFORMATICS 2006»
15 years 17 days ago
A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
Guido Sanguinetti, Magnus Rattray, Neil D. Lawrenc...
90
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APBC
2007
15 years 1 months ago
Gene Regulatory Network Inference via Regression Based Topological Refinement
Jochen Supper, Holger Fröhlich, Andreas Zell