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» Information Analysis of DNA Sequences
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112
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BMCBI
2002
109views more  BMCBI 2002»
14 years 10 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
VISUALIZATION
1998
IEEE
15 years 2 months ago
Supporting detail-in-context for the DNA representation, H-curves
This paper presents a tool for the visual exploration of DNA sequences represented as H-curves [7]. Although very long sequences can be plotted using H-curves, micro-features are ...
M. L. Lantin, M. Sheelagh T. Carpendale
ISB
2002
140views more  ISB 2002»
14 years 9 months ago
Computer system "Gene Discovery" for promoter structure analysis
Data Mining and Knowledge Discovery techniques proved to be efficient tools for variety of complex tasks in biology including DNA research. This paper presents implementation of th...
Eugenii E. Vityaev, Yuri L. Orlov, Oleg V. Vishnev...
79
Voted
BIBE
2010
IEEE
143views Bioinformatics» more  BIBE 2010»
14 years 11 months ago
The Effect of Sequence Error and Partial Training Data on BLAST Accuracy
- Metagenomics is the study of environmental samples. Because few tools exist for metagenomic analysis, a natural step has been to utilize the popular homology tool, BLAST, to sear...
Steven D. Essinger, Gail L. Rosen
BMCBI
2007
136views more  BMCBI 2007»
14 years 10 months ago
Genomorama: genome visualization and analysis
Background: The ability to visualize genomic features and design experimental assays that can target specific regions of a genome is essential for modern biology. To assist in the...
Jason D. Gans, Murray Wolinsky