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    NAR
    2011
    196views Computer Vision» more  NAR 2011»
    UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DN
    14 years 1 months ago
    UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DN
    Download  nar.oxfordjournals.org
    The Universal PBM Resource for OligonucleotideBinding Evaluation (UniPROBE) database is a centralized repository of information on the DNAbinding preferences of proteins as determ...
    Kimberly Robasky, Martha L. Bulyk
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    104
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    BMCBI
    2004
    126views more  BMCBI 2004»
    Visualization and analysis of microarray and gene ontology data with treemaps
    14 years 10 months ago
    Visualization and analysis of microarray and gene ontology data with treemaps
    Download  www.biomedcentral.com
    Background: The increasing complexity of genomic data presents several challenges for biologists. Limited computer monitor views of data complexity and the dynamic nature of data ...
    Eric H. Baehrecke, Niem Dang, Ketan Babaria, Ben S...
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    TCS
    2008
    149views Theoretical Computer Science» more  TCS 2008»
    Detection of subtle variations as consensus motifs
    14 years 10 months ago
    Detection of subtle variations as consensus motifs
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    We address the problem of detecting consensus motifs, that occur with subtle variations, across multiple sequences. These are usually functional domains in DNA sequences such as t...
    Matteo Comin, Laxmi Parida
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    BMCBI
    2008
    132views more  BMCBI 2008»
    Mixture models for analysis of melting temperature data
    14 years 10 months ago
    Mixture models for analysis of melting temperature data
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    Background: In addition to their use in detecting undesired real-time PCR products, melting temperatures are useful for detecting variations in the desired target sequences. Metho...
    Christoffer Nellåker, Fredrik Uhrzander, Joa...
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    BMCBI
    2004
    97views more  BMCBI 2004»
    Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage pattern
    14 years 10 months ago
    Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage pattern
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    Background: Oligonucleotide frequencies were shown to be conserved signatures for bacterial genomes, however, the underlying constraints have yet not been resolved in detail. In t...
    Oleg N. Reva, Burkhard Tümmler
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