: The biological world is highly stochastic and inhomogeneous in its behaviour. There are regions in DNA with high concentration of G or C bases; stretches of sequences with an abu...
Wojciech Szpankowski, Wenhui Ren, Lukasz Szpankows...
Background: It is of biological interest to make genome-wide predictions of the locations of DNA melting bubbles using statistical mechanics models. Computationally, this poses th...
Background: The PD-(D/E)XK nuclease superfamily, initially identified in type II restriction endonucleases and later in many enzymes involved in DNA recombination and repair, is o...
This paper introduces a novel algorithm for biological sequence compression that makes use of both statistical properties and repetition within sequences. A panel of experts is ma...
Minh Duc Cao, Trevor I. Dix, Lloyd Allison, Chris ...
Background: During the last few years, DNA sequence analysis has become one of the primary means of taxonomic identification of species, particularly so for species that are minut...
R. Henrik Nilsson, Erik Kristiansson, Martin Ryber...