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» Informative sampling for large unbalanced data sets
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134
Voted
BMCBI
2010
108views more  BMCBI 2010»
15 years 26 days ago
BIGSdb: Scalable analysis of bacterial genome variation at the population level
Background: The opportunities for bacterial population genomics that are being realised by the application of parallel nucleotide sequencing require novel bioinformatics platforms...
Keith A. Jolley, Martin C. J. Maiden
MLDM
2005
Springer
15 years 9 months ago
Supervised Evaluation of Dataset Partitions: Advantages and Practice
In the context of large databases, data preparation takes a greater importance : instances and explanatory attributes have to be carefully selected. In supervised learning, instanc...
Sylvain Ferrandiz, Marc Boullé
214
Voted
ICDE
2006
IEEE
198views Database» more  ICDE 2006»
16 years 4 months ago
Automating the Design and Construction of Query Forms
One of the simplest ways to query a database is through a form, where a user can fill in relevant information and obtain desired results by submitting the form. Designing good sta...
Magesh Jayapandian, H. V. Jagadish
135
Voted
BMCBI
2006
103views more  BMCBI 2006»
15 years 3 months ago
Probe-level linear model fitting and mixture modeling results in high accuracy detection of differential gene expression
Background: The identification of differentially expressed genes (DEGs) from Affymetrix GeneChips arrays is currently done by first computing expression levels from the low-level ...
Sébastien Lemieux
159
Voted
BMCBI
2005
122views more  BMCBI 2005»
15 years 3 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...