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DKE
2008
88views more  DKE 2008»
14 years 9 months ago
Quantifying process equivalence based on observed behavior
In various application domains there is a desire to compare process models, e.g., to relate an organization-specific process model to a reference model, to find a web service matc...
Ana Karla Alves de Medeiros, Wil M. P. van der Aal...
BMCBI
2006
183views more  BMCBI 2006»
14 years 9 months ago
Mining gene expression data by interpreting principal components
Background: There are many methods for analyzing microarray data that group together genes having similar patterns of expression over all conditions tested. However, in many insta...
Joseph C. Roden, Brandon W. King, Diane Trout, Ali...
CPHYSICS
2006
127views more  CPHYSICS 2006»
14 years 9 months ago
GenAnneal: Genetically modified Simulated Annealing
A modification of the standard Simulated Annealing (SA) algorithm is presented for finding the global minimum of a continuous multidimensional, multimodal function. We report resu...
Ioannis G. Tsoulos, Isaac E. Lagaris
CPHYSICS
2006
182views more  CPHYSICS 2006»
14 years 9 months ago
MinFinder: Locating all the local minima of a function
A new stochastic clustering algorithm is introduced that aims to locate all the local minima of a multidimensional continuous and differentiable function inside a bounded domain. ...
Ioannis G. Tsoulos, Isaac E. Lagaris
BMCBI
2007
168views more  BMCBI 2007»
14 years 9 months ago
Bayesian model-based inference of transcription factor activity
Background: In many approaches to the inference and modeling of regulatory interactions using microarray data, the expression of the gene coding for the transcription factor is co...
Simon Rogers, Raya Khanin, Mark Girolami