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BMCBI
2010
87views more  BMCBI 2010»
14 years 10 months ago
Prodigal: prokaryotic gene recognition and translation initiation site identification
Background: The quality of automated gene prediction in microbial organisms has improved steadily over the past decade, but there is still room for improvement. Increasing the num...
Doug Hyatt, Gwo-Liang Chen, Philip F. LoCascio, Mi...
BMCBI
2010
144views more  BMCBI 2010»
14 years 10 months ago
Identifying overrepresented concepts in gene lists from literature: a statistical approach based on Poisson mixture model
Background: Large-scale genomic studies often identify large gene lists, for example, the genes sharing the same expression patterns. The interpretation of these gene lists is gen...
Xin He, Moushumi Sen Sarma, Xu Ling, Brant W. Chee...
PLDI
2004
ACM
15 years 3 months ago
Region inference for an object-oriented language
Region-based memory management offers several important potential advantages over garbage collection, including real-time performance, better data locality, and more efficient us...
Wei-Ngan Chin, Florin Craciun, Shengchao Qin, Mart...
CHARME
2003
Springer
100views Hardware» more  CHARME 2003»
15 years 3 months ago
Inductive Assertions and Operational Semantics
This paper shows how classic inductive assertions can be used in conjunction with an operational semantics to prove partial correctness properties of programs. The method imposes o...
J. Strother Moore
LFP
1992
140views more  LFP 1992»
14 years 11 months ago
Global Tagging Optimization by Type Inference
Tag handling accounts for a substantial amount of execution cost in latently typed languages such as Common LISP and Scheme, especially on architectures that provide no special ha...
Fritz Henglein