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BMCBI
2004
149views more  BMCBI 2004»
13 years 6 months ago
MiCoViTo: a tool for gene-centric comparison and visualization of yeast transcriptome states
Background: Information obtained by DNA microarray technology gives a rough snapshot of the transcriptome state, i.e., the expression level of all the genes expressed in a cell po...
Gaëlle Lelandais, Philippe Marc, Pierre Vince...
BMCBI
2004
148views more  BMCBI 2004»
13 years 6 months ago
Bioinformatics analysis of SARS coronavirus genome polymorphism
Background: We have compared 38 isolates of the SARS-CoV complete genome. The main goal was twofold: first, to analyze and compare nucleotide sequences and to identify positions o...
Gordana Pavlovic-Lazetic, Nenad S. Mitic, Milos V....
BMCBI
2002
126views more  BMCBI 2002»
13 years 6 months ago
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
Background: When analyzing protein sequences using sequence similarity searches, orthologous sequences (that diverged by speciation) are more reliable predictors of a new protein&...
Christian M. Zmasek, Sean R. Eddy
COLING
2002
13 years 6 months ago
Creating a Finite-State Parser with Application Semantics
Parsli is a finite-state (FS) parser which can be tailored to the lexicon, syntax, and semantics of a particular application using a hand-editable declarative lexicon. The lexicon...
Owen Rambow, Srinivas Bangalore, Tahir Butt, Alexi...
NAR
2000
94views more  NAR 2000»
13 years 6 months ago
INE: a rice genome database with an integrated map view
The Rice Genome Research Program (RGP) launched a large-scale rice genome sequencing in 1998 aimed at decoding all genetic information in rice. A new genome database called INE (I...
Katsumi Sakata, Baltazar A. Antonio, Yoshiyuki Muk...