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» Integrating and Exchanging XML Data Using Ontologies
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BMCBI
2005
292views more  BMCBI 2005»
15 years 4 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
DEXA
2003
Springer
95views Database» more  DEXA 2003»
15 years 9 months ago
XML and Knowledge Technologies for Semantic-Based Indexing of Paper Documents
Effective daily processing of large amounts of paper documents in office environments requires the application of semantic-based indexing techniques during the transformation of pa...
Donato Malerba, Michelangelo Ceci, Margherita Bera...
SSDBM
1999
IEEE
135views Database» more  SSDBM 1999»
15 years 8 months ago
Query Processing in the TAMBIS Bioinformatics Source Integration System
Conducting bioinformatic analyses involves biologists in expressing requests over a range of highly heterogeneous information sources and software tools. Such activities are labor...
Norman W. Paton, Robert Stevens, Patricia G. Baker...
EDBT
2012
ACM
228views Database» more  EDBT 2012»
13 years 6 months ago
Towards scalable data integration under constraints
In this paper we consider the problem of answering queries using views, with or without ontological constraints, which is important for data integration, query optimization, and d...
George Konstantinidis, José Luis Ambite
BMCBI
2007
108views more  BMCBI 2007»
15 years 4 months ago
Integrating sequence and structural biology with DAS
Background: The Distributed Annotation System (DAS) is a network protocol for exchanging biological data. It is frequently used to share annotations of genomes and protein sequenc...
Andreas Prlic, Thomas A. Down, Eugene Kulesha, Rob...