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BMCBI
2010
164views more  BMCBI 2010»
15 years 2 months ago
Flexible network reconstruction from relational databases with Cytoscape and CytoSQL
Background: Molecular interaction networks can be efficiently studied using network visualization software such as Cytoscape. The relevant nodes, edges and their attributes can be...
Kris Laukens, Jens Hollunder, Thanh Hai Dang, Geer...
BMCBI
2010
125views more  BMCBI 2010»
15 years 2 months ago
Compartmentalization of the Edinburgh Human Metabolic Network
Background: Direct in vivo investigation of human metabolism is complicated by the distinct metabolic functions of various sub-cellular organelles. Diverse micro-environments in d...
Tong Hao, Hongwu Ma, Xue-Ming Zhao, Igor Goryanin
CORR
2008
Springer
185views Education» more  CORR 2008»
15 years 2 months ago
Realizing Fast, Scalable and Reliable Scientific Computations in Grid Environments
The practical realization of managing and executing large scale scientific computations efficiently and reliably is quite challenging. Scientific computations often invo...
Yong Zhao, Ioan Raicu, Ian T. Foster, Mihael Hateg...
DAM
2008
129views more  DAM 2008»
15 years 2 months ago
Minimum cost homomorphisms to semicomplete multipartite digraphs
For digraphs D and H, a mapping f : V (D)V (H) is a homomorphism of D to H if uv A(D) implies f(u)f(v) A(H). For a fixed directed or undirected graph H and an input graph D, the...
Gregory Gutin, Arash Rafiey, Anders Yeo
BMCBI
2006
153views more  BMCBI 2006»
15 years 2 months ago
2DDB - a bioinformatics solution for analysis of quantitative proteomics data
Background: We present 2DDB, a bioinformatics solution for storage, integration and analysis of quantitative proteomics data. As the data complexity and the rate with which it is ...
Lars Malmström, György Marko-Varga, Guni...