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BMCBI
2008
202views more  BMCBI 2008»
14 years 11 months ago
Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
Background: Integrating data from multiple global assays and curated databases is essential to understand the spatiotemporal interactions within cells. Different experiments measu...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
99
Voted
BMCBI
2006
137views more  BMCBI 2006»
14 years 11 months ago
INTEGRATOR: interactive graphical search of large protein interactomes over the Web
Background: The rapid growth of protein interactome data has elevated the necessity and importance of network analysis tools. However, unlike pure text data, network search spaces...
Aaron N. Chang, Jason McDermott, Zachary Frazier, ...
TOG
2008
92views more  TOG 2008»
14 years 10 months ago
Optimizing cubature for efficient integration of subspace deformations
We propose an efficient scheme for evaluating nonlinear subspace forces (and Jacobians) associated with subspace deformations. The core problem we address is efficient integration...
Steven S. An, Theodore Kim, Doug L. James
91
Voted
BMCBI
2006
109views more  BMCBI 2006»
14 years 11 months ago
An integrated system for genetic analysis
Background: Large-scale genetic mapping projects require data management systems that can handle complex phenotypes and detect and correct high-throughput genotyping errors, yet a...
Simon Fiddy, David Cattermole, Dong Xie, Xiao Yuan...
110
Voted
ECLIPSE
2005
ACM
15 years 26 days ago
Leveraging Eclipse for integrated model-based engineering of web service compositions
In this paper we detail the design and implementation of an Eclipse plug-in for an integrated, model-based approach, to the engineering of web service compositions. The plug-in al...
Howard Foster, Sebastián Uchitel, Jeff Mage...