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BMCBI
2007
123views more  BMCBI 2007»
15 years 4 months ago
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...
BMCBI
2005
124views more  BMCBI 2005»
15 years 4 months ago
Internet-based profiler system as integrative framework to support translational research
Background: Translational research requires taking basic science observations and developing them into clinically useful tests and therapeutics. We have developed a process to dev...
Robert Kim, Francesca Demichelis, Jeffery Tang, Al...
175
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HIPC
2009
Springer
15 years 2 months ago
Integrating and optimizing transactional memory in a data mining middleware
As the size of available datasets in various domains is growing rapidly, there is an increasing need for scaling data mining implementations. Coupled with the current trends in co...
Vignesh T. Ravi, Gagan Agrawal
BMCBI
2010
193views more  BMCBI 2010»
14 years 11 months ago
Mayday - integrative analytics for expression data
Background: DNA Microarrays have become the standard method for large scale analyses of gene expression and epigenomics. The increasing complexity and inherent noisiness of the ge...
Florian Battke, Stephan Symons, Kay Nieselt
BMCBI
2011
14 years 11 months ago
DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
Background: Accurate identification of protein domain boundaries is useful for protein structure determination and prediction. However, predicting protein domain boundaries from a...
Jesse Eickholt, Xin Deng, Jianlin Cheng