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» Integration with Ontologies
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BMCBI
2006
167views more  BMCBI 2006»
14 years 10 months ago
GOurmet: A tool for quantitative comparison and visualization of gene expression profiles based on gene ontology (GO) distributi
Background: The ever-expanding population of gene expression profiles (EPs) from specified cells and tissues under a variety of experimental conditions is an important but difficu...
Jason M. Doherty, Lynn K. Carmichael, Jason C. Mil...
BMCBI
2006
150views more  BMCBI 2006»
14 years 10 months ago
Cluster analysis of protein array results via similarity of Gene Ontology annotation
Background: With the advent of high-throughput proteomic experiments such as arrays of purified proteins comes the need to analyse sets of proteins as an ensemble, as opposed to t...
Cheryl Wolting, C. Jane McGlade, David Tritchler
SEMWEB
2009
Springer
15 years 4 months ago
Semantic Geo-Catalog: A Scenario and Requirements
Abstract. In this short paper we present a scenario and requirements for ontology matching posed by a geographical application, namely a semantic geocatalog, which is an integral p...
Pavel Shvaiko, Lorenzino Vaccari, Gaia Trecarichi
BMCBI
2007
186views more  BMCBI 2007»
14 years 10 months ago
GeneBins: a database for classifying gene expression data, with application to plant genome arrays
Background: To interpret microarray experiments, several ontological analysis tools have been developed. However, current tools are limited to specific organisms. Results: We deve...
Nicolas Goffard, Georg Weiller
WWW
2004
ACM
15 years 10 months ago
Web taxonomy integration using support vector machines
We address the problem of integrating objects from a source taxonomy into a master taxonomy. This problem is not only currently pervasive on the web, but also important to the eme...
Dell Zhang, Wee Sun Lee