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» Integrative Levels of Program Comprehension
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BMCBI
2010
143views more  BMCBI 2010»
14 years 9 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
BMCBI
2005
125views more  BMCBI 2005»
14 years 9 months ago
Query3d: a new method for high-throughput analysis of functional residues in protein structures
Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
Gabriele Ausiello, Allegra Via, Manuela Helmer-Cit...
INTERNET
2002
145views more  INTERNET 2002»
14 years 9 months ago
Where is Middleware?
stract level, remote procedure calls enable programmers to invoke (possibly remote) services as if they were intra-application procedure calls. Much like function or procedure call...
Steve Vinoski
ASPLOS
2004
ACM
15 years 3 months ago
Continual flow pipelines
Increased integration in the form of multiple processor cores on a single die, relatively constant die sizes, shrinking power envelopes, and emerging applications create a new cha...
Srikanth T. Srinivasan, Ravi Rajwar, Haitham Akkar...
BMCBI
2008
118views more  BMCBI 2008»
14 years 9 months ago
MetWAMer: eukaryotic translation initiation site prediction
Background: Translation initiation site (TIS) identification is an important aspect of the gene annotation process, requisite for the accurate delineation of protein sequences fro...
Michael E. Sparks, Volker Brendel