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» InterRNA: a database of base interactions in RNA structures
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BMCBI
2007
135views more  BMCBI 2007»
14 years 10 months ago
Sequence similarity is more relevant than species specificity in probabilistic backtranslation
Background: Backtranslation is the process of decoding a sequence of amino acids into the corresponding codons. All synthetic gene design systems include a backtranslation module....
Alfredo Ferro, Rosalba Giugno, Giuseppe Pigola, Al...
ERCIMDL
1999
Springer
111views Education» more  ERCIMDL 1999»
15 years 2 months ago
PIA - A Generic Model and System for Interactive Product and Service Catalogs
Abstract. This text motivates and de nes a generic model for interactive online or o ine product catalogs. Based on a detailed requirements analysis, the data model is de ned usi...
Florian Matthes, Ulrike Steffens
DEXAW
2008
IEEE
131views Database» more  DEXAW 2008»
15 years 4 months ago
FleXplorer: A Framework for Providing Faceted and Dynamic Taxonomy-Based Information Exploration
Faceted and dynamic taxonomies are increasingly used nowadays in a plethora of applications. For developing user interfaces grounded on this interaction paradigm, it is advantageo...
Yannis Tzitzikas, Nikos Armenatzoglou, Panagiotis ...
117
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VLDB
2002
ACM
83views Database» more  VLDB 2002»
14 years 10 months ago
Searching on the Secondary Structure of Protein Sequences
In spite of the many decades of progress in database research, surprisingly scientists in the life sciences community still struggle with inefficient and awkward tools for queryin...
Laurie Hammel, Jignesh M. Patel
BMCBI
2006
180views more  BMCBI 2006»
14 years 10 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...