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» InterRNA: a database of base interactions in RNA structures
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BMCBI
2007
114views more  BMCBI 2007»
14 years 10 months ago
Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome
Background: The structure annotation of a genome is based either on ab initio methodologies or on similaritiy searches versus molecules that have been already annotated. Ab initio...
Nunzio D'Agostino, Alessandra Traini, Luigi Frusci...
AVI
2008
14 years 11 months ago
Query-through-drilldown: data-oriented extensional queries
Traditional database query formulation is intensional: at the level of schemas, table and column names. Previous work has shown that filters can be created using a query paradigm ...
Alan J. Dix, Damon Oram
81
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BMCBI
2008
149views more  BMCBI 2008»
14 years 10 months ago
Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence
Background: Modern proteomes evolved by modification of pre-existing ones. It is extremely important to comparative biology that related proteins be identified as members of the s...
Adriano Barbosa-Silva, Venkata P. Satagopam, Reinh...
BMCBI
2008
124views more  BMCBI 2008»
14 years 10 months ago
Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
Background: Non-homology based methods such as phylogenetic profiles are effective for predicting functional relationships between proteins with no considerable sequence or struct...
Ryosuke Watanabe, Enrique Morett, Edgar E. Vallejo
CGF
1999
125views more  CGF 1999»
14 years 10 months ago
Partitioning and Handling Massive Models for Interactive Collision Detection
We describe an approach for interactive collision detection and proximity computations on massive models composed of millions of geometric primitives. We address issues related to...
Andy Wilson, Eric Larsen, Dinesh Manocha, Ming C. ...