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AAAI
2006
14 years 11 months ago
Decision Tree Methods for Finding Reusable MDP Homomorphisms
straction is a useful tool for agents interacting with environments. Good state abstractions are compact, reuseable, and easy to learn from sample data. This paper and extends two...
Alicia P. Wolfe, Andrew G. Barto
JBCB
2007
161views more  JBCB 2007»
14 years 9 months ago
On Cooperative Quasi-Equilibrium Models of transcriptional Regulation
Mechanistic models for transcriptional regulation are derived using the methods of equilibrium statistical mechanics, to model equilibrating processes that occur at a fast time sc...
Eric Mjolsness
BMCBI
2008
134views more  BMCBI 2008»
14 years 10 months ago
Prediction of protein-protein binding site by using core interface residue and support vector machine
Background: The prediction of protein-protein binding site can provide structural annotation to the protein interaction data from proteomics studies. This is very important for th...
Nan Li, Zhonghua Sun, Fan Jiang
BMCBI
2007
138views more  BMCBI 2007»
14 years 10 months ago
A systematic approach to detecting transcription factors in response to environmental stresses
Background: Eukaryotic cells have developed mechanisms to respond to external environmental or physiological changes (stresses). In order to increase the activities of stress-prot...
Li-Hsieh Lin, Hsiao-Ching Lee, Wen-Hsiung Li, Bor-...
BMCBI
2010
149views more  BMCBI 2010»
14 years 10 months ago
RuleMonkey: software for stochastic simulation of rule-based models
Background: The system-level dynamics of many molecular interactions, particularly protein-protein interactions, can be conveniently represented using reaction rules, which can be...
Joshua Colvin, Michael I. Monine, Ryan N. Gutenkun...