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BMCBI
2010
114views more  BMCBI 2010»
15 years 3 months ago
Detection of gene orthology from gene co-expression and protein interaction networks
Background: Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our und...
Fadi Towfic, Susan VanderPlas, Casey A. Oliver, Ol...
117
Voted
RECOMB
2007
Springer
16 years 3 months ago
A Feature-Based Approach to Modeling Protein-DNA Interactions
Transcription factor (TF) binding to its DNA target site is a fundamental regulatory interaction. The most common model used to represent TF binding specificities is a position spe...
Eilon Sharon, Eran Segal
PRIB
2009
Springer
187views Bioinformatics» more  PRIB 2009»
15 years 8 months ago
Semi-supervised Prediction of Protein Interaction Sentences Exploiting Semantically Encoded Metrics
Protein-protein interaction (PPI) identification is an integral component of many biomedical research and database curation tools. Automation of this task through classification ...
Tamara Polajnar, Mark A. Girolami
149
Voted
CSWWS
2006
15 years 7 months ago
A Distributed Agent System upon Semantic Web Technologies to Provide Biological Data
Bioinformaticians are accustomed to going through analysis steps, in which they employ several data sources, like protein sequence and protein interaction databases, to carry out t...
Farzad Kohantorabi, Gregory Butler, Christopher J....
97
Voted
KDD
2007
ACM
157views Data Mining» more  KDD 2007»
16 years 3 months ago
Association analysis-based transformations for protein interaction networks: a function prediction case study
Gaurav Pandey, Michael Steinbach, Rohit Gupta, Tus...