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GECCO
2004
Springer
164views Optimization» more  GECCO 2004»
15 years 9 months ago
Fuzzy Dominance Based Multi-objective GA-Simplex Hybrid Algorithms Applied to Gene Network Models
Hybrid algorithms that combine genetic algorithms with the Nelder-Mead simplex algorithm have been effective in solving certain optimization problems. In this article, we apply a s...
Praveen Koduru, Sanjoy Das, Stephen Welch, Judith ...
BMCBI
2005
88views more  BMCBI 2005»
15 years 4 months ago
Using large-scale perturbations in gene network reconstruction
Background: Recent analysis of the yeast gene network shows that most genes have few inputs, indicating that enumerative gene reconstruction methods are both useful and computatio...
Thomas MacCarthy, Andrew Pomiankowski, Robert Seym...
JIB
2006
110views more  JIB 2006»
15 years 4 months ago
Combining biomedical knowledge and transcriptomic data to extract new knowledge on genes
In biomedical research, interpretation of microarray data requires confrontation of data and knowledge from heterogeneous resources, either in the biomedical domain or in genomics...
Emilie Guérin, Gwenaëlle Marquet, Juli...
BMCBI
2010
193views more  BMCBI 2010»
15 years 4 months ago
Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements
Background: Affymetrix GeneChip microarrays are popular platforms for expression profiling in two types of studies: detection of differential expression computed by p-values of t-...
Jakub Mieczkowski, Magdalena E. Tyburczy, Michal D...
APVIS
2008
15 years 5 months ago
Interactive Visual Analysis of the NSF Funding Information
This paper presents an interactive visualization toolkit for navigating and analyzing the National Science Foundation (NSF) funding information. Our design builds upon the treemap...
Shixia Liu, Nan Cao, Hao Lv