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BMCBI
2008
103views more  BMCBI 2008»
14 years 12 months ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
BMCBI
2007
181views more  BMCBI 2007»
14 years 12 months ago
Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
Background: Macromolecular visualization as well as automated structural and functional annotation tools play an increasingly important role in the post-genomic era, contributing ...
Aleksey A. Porollo, Jaroslaw Meller
BMCBI
2008
141views more  BMCBI 2008»
14 years 12 months ago
Ontology-guided data preparation for discovering genotype-phenotype relationships
Complexity of post-genomic data and multiplicity of mining strategies are two limits to Knowledge Discovery in Databases (KDD) in life sciences. Because they provide a semantic fr...
Adrien Coulet, Malika Smaïl-Tabbone, Pascale ...
EOR
2008
99views more  EOR 2008»
14 years 11 months ago
Ordinal regression revisited: Multiple criteria ranking using a set of additive value functions
We present a new method, called UTAGMS , for multiple criteria ranking of alternatives from set A using a set of additive value functions which result from an ordinal regression. ...
Salvatore Greco, Vincent Mousseau, Roman Slowinski
ASE
2006
106views more  ASE 2006»
14 years 11 months ago
Integrating COTS Software into Systems through Instrumentation and Reasoning
Commercial-off-the-shelf (COTS) software tends to be cheap, reliable, and functionally powerful due to its large user base. It has thus become highly desirable to incorporate COTS ...
Alexander Egyed, Robert Balzer