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164
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BMCBI
2008
152views more  BMCBI 2008»
15 years 2 months ago
Predicting biological system objectives de novo from internal state measurements
Background: Optimization theory has been applied to complex biological systems to interrogate network properties and develop and refine metabolic engineering strategies. For examp...
Erwin P. Gianchandani, Matthew A. Oberhardt, Antho...
138
Voted
BMCBI
2008
153views more  BMCBI 2008»
15 years 2 months ago
Estimating the size of the solution space of metabolic networks
Background: Cellular metabolism is one of the most investigated system of biological interactions. While the topological nature of individual reactions and pathways in the network...
Alfredo Braunstein, Roberto Mulet, Andrea Pagnani
AAMAS
2006
Springer
15 years 2 months ago
CONFIDANT: Collaborative Object Notification Framework for Insider Defense using Autonomous Network Transactions
File Integrity Analyzers serve as a component of an Intrusion Detection environment by performing filesystem inspections to verify the content of security-critical files in order ...
Adam J. Rocke, Ronald F. DeMara
FUIN
2008
119views more  FUIN 2008»
15 years 2 months ago
Modeling Communication with Synchronized Environments
A deterministic behavior of systems composed of several modules is a desirable design goal. Assembling a complex system from components requires also a high degree of re-usability....
Tiberiu Seceleanu, Axel Jantsch
142
Voted
BMCBI
2006
122views more  BMCBI 2006»
15 years 2 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen