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» Interactive visual analysis of time-series microarray data
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BMCBI
2008
156views more  BMCBI 2008»
14 years 9 months ago
ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses
Background: A survey of microarray databases reveals that most of the repository contents and data models are heterogeneous (i.e., data obtained from different chip manufacturers)...
Todd H. Stokes, J. T. Torrance, Henry Li, May D. W...
VIS
2009
IEEE
163views Visualization» more  VIS 2009»
15 years 10 months ago
Visual Exploration of Climate Variability Changes Using Wavelet Analysis
Due to its nonlinear nature, the climate system shows quite high natural variability on different time scales, including multiyear oscillations such as the El Ni~no Southern Oscill...
Heike Jänicke, Michael Böttinger, Uwe Mikolaje...
ACAL
2007
Springer
15 years 3 months ago
An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity
Abstract. This paper illustrates how the Quadratic Assignment Problem (QAP) is used as a mathematical model that helps to produce a visualization of microarray data, based on the r...
Mario Inostroza-Ponta, Alexandre Mendes, Regina Be...
BMCBI
2006
139views more  BMCBI 2006»
14 years 9 months ago
Integrated functional visualization of eukaryotic genomes
Background: Increasing amounts of data from large scale whole genome analysis efforts demands convenient tools for manipulation, visualization and investigation. Whole genome plot...
Rohit Ghai, Hannes Lindemann, Trinad Chakraborty
BMCBI
2008
115views more  BMCBI 2008»
14 years 9 months ago
Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data
Background: Time-course microarray experiments are being increasingly used to characterize dynamic biological processes. In these experiments, the goal is to identify genes differ...
Sudhakar Jonnalagadda, Rajagopalan Srinivasan