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» Interactive visual analysis of time-series microarray data
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INFOVIS
2005
IEEE
15 years 3 months ago
Visualization of Graphs with Associated Timeseries Data
The most common approach to support analysis of graphs with associated time series data include: overlay of data on graph vertices for one timepoint at a time by manipulating a vi...
Purvi Saraiya, Peter Lee, Chris North
BMCBI
2005
124views more  BMCBI 2005»
14 years 9 months ago
ErmineJ: Tool for functional analysis of gene expression data sets
Background: It is common for the results of a microarray study to be analyzed in the context of biologically-motivated groups of genes such as pathways or Gene Ontology categories...
Homin K. Lee, William Braynen, Kiran Keshav, Paul ...
88
Voted
BMCBI
2007
185views more  BMCBI 2007»
14 years 9 months ago
GEDI: a user-friendly toolbox for analysis of large-scale gene expression data
Background: Several mathematical and statistical methods have been proposed in the last few years to analyze microarray data. Most of those methods involve complicated formulas, a...
André Fujita, João Ricardo Sato, Car...
BMCBI
2006
160views more  BMCBI 2006»
14 years 9 months ago
MIMAS: an innovative tool for network-based high density oligonucleotide microarray data management and annotation
Background: The high-density oligonucleotide microarray (GeneChip) is an important tool for molecular biological research aiming at large-scale detection of small nucleotide polym...
Leandro Hermida, Olivier Schaad, Philippe Demougin...
BMCBI
2004
211views more  BMCBI 2004»
14 years 9 months ago
GenomeViz: visualizing microbial genomes
Background: An increasing number of microbial genomes are being sequenced and deposited in public databases. In addition, several closely related strains are also being sequenced ...
Rohit Ghai, Torsten Hain, Trinad Chakraborty