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» Interactive visual analysis of time-series microarray data
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ISBI
2004
IEEE
15 years 10 months ago
SUMA: An Interface for Surface-Based Intra- and Inter-Subject Analysis with AFNI
Surface-based brain imaging analysis is increasingly being used for detailed analysis of the topology of brain activation patterns and changes in cerebral gray matter. Here we pre...
Brenna Argall, Richard Reynolds, Robert J. Cox, Sh...
BMCBI
2008
97views more  BMCBI 2008»
14 years 10 months ago
MCM-test: a fuzzy-set-theory-based approach to differential analysis of gene pathways
Background: Gene pathway can be defined as a group of genes that interact with each other to perform some biological processes. Along with the efforts to identify the individual g...
Lily R. Liang, Vinay Mandal, Yi Lu, Deepak Kumar
BMCBI
2006
108views more  BMCBI 2006»
14 years 9 months ago
Probe set algorithms: is there a rational best bet?
Affymetrix microarrays have become a standard experimental platform for studies of mRNA expression profiling. Their success is due, in part, to the multiple oligonucleotide featur...
Jinwook Seo, Eric P. Hoffman
BMCBI
2008
144views more  BMCBI 2008»
14 years 10 months ago
WGCNA: an R package for weighted correlation network analysis
Background: Correlation networks are increasingly being used in bioinformatics applications. For example, weighted gene co-expression network analysis is a systems biology method ...
Peter Langfelder, Steve Horvath
CBMS
2006
IEEE
15 years 3 months ago
A Framework for Web-Based Interactive Applications of High-Resolution 3D Medical Image Data
With the advances in medical imaging devices, large volumes of high-resolution 3D medical image data have been produced. These high-resolution 3D data are very large in size, and ...
Danzhou Liu, Kien A. Hua, Kiminobu Sugaya