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BMCBI
2010
109views more  BMCBI 2010»
14 years 10 months ago
FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods
Background: Likelihood (ML)-based phylogenetic inference has become a popular method for estimating the evolutionary relationships among species based on genomic sequence data. Th...
Stephanie Zierke, Jason D. Bakos
DAC
2001
ACM
15 years 10 months ago
Efficient Large-Scale Power Grid Analysis Based on Preconditioned Krylov-Subspace Iterative Methods
In this paper, we propose preconditioned Krylov-subspace iterative methods to perform efficient DC and transient simulations for large-scale linear circuits with an emphasis on po...
Tsung-Hao Chen, Charlie Chung-Ping Chen
ASPDAC
2006
ACM
158views Hardware» more  ASPDAC 2006»
15 years 3 months ago
Analysis of scratch-pad and data-cache performance using statistical methods
— An effectively designed and efficiently used memory hierarchy, composed of scratch-pads or cache, is seen today as the key to obtaining energy and performance gains in data-do...
Javed Absar, Francky Catthoor
BMCBI
2007
143views more  BMCBI 2007»
14 years 10 months ago
An adaptive bin framework search method for a beta-sheet protein homopolymer model
Background: The problem of protein structure prediction consists of predicting the functional or native structure of a protein given its linear sequence of amino acids. This probl...
Alena Shmygelska, Holger H. Hoos
LCTRTS
2010
Springer
15 years 4 months ago
Analysis and approximation for bank selection instruction minimization on partitioned memory architecture
A large number of embedded systems include 8-bit microcontrollers for their energy efficiency and low cost. Multi-bank memory architecture is commonly applied in 8-bit microcontr...
Minming Li, Chun Jason Xue, Tiantian Liu, Yingchao...