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» Internal loops in RNA secondary structure prediction

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NAR
2007

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taveRNA: a web suite for RNA algorithms and applications

14 years 11 months ago

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We present taveRNA, a web server package that hosts three RNA web services: alteRNA, inteRNA and pRuNA. alteRNA is a new alternative for RNA secondary structure prediction. It is ...

Cagri Aksay, Raheleh Salari, Emre Karakoç, ...

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BIOINFORMATICS
2005

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Predicting a set of minimal free energy RNA secondary structures common to two sequences

14 years 11 months ago

Download rna.urmc.rochester.edu

David H. Mathews

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BIOINFORMATICS
2004

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Prediction of locally stable RNA secondary structures for genome-wide surveys

14 years 11 months ago

Download www.bioinf.uni-leipzig.de

Ivo L. Hofacker, Barbara Priwitzer, Peter F. Stadl...

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WABI
2007
Springer

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HFold: RNA Pseudoknotted Secondary Structure Prediction Using Hierarchical Folding

15 years 5 months ago

Download www.stanford.edu

Hosna Jabbari, Anne Condon, Ana Pop, Cristina Pop,...

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BIOINFORMATICS
2008

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FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space

14 years 12 months ago

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