126 search results - page 5 / 26 » Internal loops in RNA secondary structure prediction |
BMCBI
2004
14 years 9 months ago
2004
Background: The proliferation of structural and functional studies of RNA has revealed an increasing range of RNA's structural repertoire. Toward the objective of systematic ...
JCO
2007
14 years 9 months ago
2007
The 2-interval pattern problem over its various models and restrictions was proposed by Vialette (2004) for the application of RNA secondary structure prediction. We present an O(n...
BMCBI
2004
14 years 9 months ago
2004
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
BMCBI
2008
14 years 9 months ago
2008
Background: Aligning homologous non-coding RNAs (ncRNAs) correctly in terms of sequence and structure is an unresolved problem, due to both mathematical complexity and imperfect s...
ISBRA
2007
Springer
15 years 3 months ago
2007
Springer
Abstract. The lattice approach to biological structural analysis was made popular by the HP model for protein folding, but had not been used previously for RNA secondary structure ...