126 search results - page 9 / 26 » Internal loops in RNA secondary structure prediction |
METMBS
2004
14 years 11 months ago
2004
Abstract One approach to predict the secondary structure of RNA is the comparative approach. This approach is used when alignment of several homologous sequences of a RNA is availa...
ICASSP
2008
IEEE
15 years 4 months ago
2008
IEEE
We propose an algorithm for estimating the common secondary structure, alignment, and posterior base pairing probabilities for two RNA sequences. A definition of structural align...
AAIM
2007
Springer
2007
Springer
Improved Approximation Algorithms for Predicting RNA Secondary Structures with Arbitrary Pseudoknots
15 years 3 months ago
We study three closely related problems motivated by the prediction of RNA secondary structures with arbitrary pseudoknots: the MAXIMUM BASE PAIR STACKINGS problem proposed by Ieon...
ASAP
2008
IEEE
15 years 4 months ago
2008
IEEE
RNA structure prediction, or folding, is a computeintensive task that lies at the core of several search applications in bioinformatics. We begin to address the need for high-thro...
144
click to vote
WABI
2010
Springer
14 years 8 months ago
2010
Springer
Abstract. We present three heuristic strategies for folding RNA sequences into secondary structures including kissing hairpin motifs. The new idea is to construct a kissing hairpin...