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BMCBI
2004
228views more  BMCBI 2004»
15 years 4 months ago
An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...
TPDS
1998
122views more  TPDS 1998»
15 years 4 months ago
Managing Statistical Behavior of Large Data Sets in Shared-Nothing Architectures
—Increasingly larger data sets are being stored in networked architectures. Many of the available data structures are not easily amenable to parallel realizations. Hashing scheme...
Isidore Rigoutsos, Alex Delis
BMCBI
2007
128views more  BMCBI 2007»
15 years 5 months ago
Model order selection for bio-molecular data clustering
Background: Cluster analysis has been widely applied for investigating structure in bio-molecular data. A drawback of most clustering algorithms is that they cannot automatically ...
Alberto Bertoni, Giorgio Valentini
137
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ISMB
1997
15 years 6 months ago
Standardized Representations of the Literature: Combining Diverse Sources of Ribosomal Data
We are building a knowledge base (KB) of published structural data on the 30s ribosomal subunit in prokaryotes. Our KB is distinguished by a standardized representation of biologi...
Russ B. Altman, Neil F. Abernethy, Richard O. Chen
DMKD
2003
ACM
110views Data Mining» more  DMKD 2003»
15 years 10 months ago
Weave amino acid sequences for protein secondary structure prediction
Given a known protein sequence, predicting its secondary structure can help understand its three-dimensional (tertiary) structure, i.e., the folding. In this paper, we present an ...
Xiaochun Yang, Bin Wang