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WABI
2007
Springer
122views Bioinformatics» more  WABI 2007»
15 years 3 months ago
Algorithms for the Extraction of Synteny Blocks from Comparative Maps
In comparing genomic maps, it is often difficult to distinguish mapping errors and incorrectly resolved paralogies from genuine rearrangements of the genomes. A solution to this ...
Vicky Choi, Chunfang Zheng, Qian Zhu, David Sankof...
ICPP
2006
IEEE
15 years 3 months ago
A Parallel External-Memory Frontier Breadth-First Traversal Algorithm for Clusters of Workstations
— This paper presents a parallel external-memory algorithm for performing a breadth-first traversal of an implicit graph on a cluster of workstations. The algorithm is a paralle...
Robert Niewiadomski, José Nelson Amaral, Ro...
CC
2003
Springer
15 years 2 months ago
Early Control of Register Pressure for Software Pipelined Loops
Abstract. The register allocation in loops is generally performed after or during the software pipelining process. This is because doing a conventional register allocation at firs...
Sid Ahmed Ali Touati, Christine Eisenbeis
ISAAC
1992
Springer
125views Algorithms» more  ISAAC 1992»
15 years 1 months ago
A Simple Test for the Consecutive Ones Property
A (0,1)-matrix satisfies the consecutive ones property if there exists a column permutation such that the ones in each row of the resulting matrix are consecutive. Booth and Lueke...
Wen-Lian Hsu
STOC
2010
ACM
211views Algorithms» more  STOC 2010»
15 years 2 months ago
Distributed Computation in Dynamic Networks
In this paper we investigate distributed computation in dynamic networks in which the network topology changes from round to round. We consider a worst-case model in which the com...
Fabian Kuhn, Nancy Lynch and Rotem Oshman