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BMCBI
2010
74views more  BMCBI 2010»
15 years 4 months ago
A weighted q-gram method for glycan structure classification
Background: Glycobiology pertains to the study of carbohydrate sugar chains, or glycans, in a particular cell or organism. Many computational approaches have been proposed for ana...
Limin Li, Wai-Ki Ching, Takako Yamaguchi, Kiyoko F...
BMCBI
2005
131views more  BMCBI 2005»
15 years 4 months ago
Functional annotation by identification of local surface similarities: a novel tool for structural genomics
Background: Protein function is often dependent on subsets of solvent-exposed residues that may exist in a similar three-dimensional configuration in non homologous proteins thus ...
Fabrizio Ferrè, Gabriele Ausiello, Andreas ...
SAT
2009
Springer
113views Hardware» more  SAT 2009»
15 years 11 months ago
Exploiting Cycle Structures in Max-SAT
We investigate the role of cycles structures (i.e., subsets of clauses of the form ¯l1 ∨ l2, ¯l1 ∨ l3, ¯l2 ∨ ¯l3) in the quality of the lower bound (LB) of modern MaxSAT ...
Chu Min Li, Felip Manyà, Nouredine Ould Moh...
COMPGEOM
2003
ACM
15 years 9 months ago
Cache-oblivious data structures for orthogonal range searching
We develop cache-oblivious data structures for orthogonal range searching, the problem of finding all T points in a set of N points in Êd lying in a query hyper-rectangle. Cache...
Pankaj K. Agarwal, Lars Arge, Andrew Danner, Bryan...
SIGMOD
2010
ACM
250views Database» more  SIGMOD 2010»
15 years 4 months ago
Expressive and flexible access to web-extracted data: a keyword-based structured query language
Automated extraction of structured data from Web sources often leads to large heterogeneous knowledge bases (KB), with data and schema items numbering in the hundreds of thousands...
Jeffrey Pound, Ihab F. Ilyas, Grant E. Weddell