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RECOMB
2006
Springer
16 years 29 days ago
Simulating Protein Motions with Rigidity Analysis
Abstract. Protein motions, ranging from molecular flexibility to largescale conformational change, play an essential role in many biochemical processes. Despite the explosion in ou...
Shawna L. Thomas, Xinyu Tang, Lydia Tapia, Nancy M...
RECOMB
2005
Springer
16 years 29 days ago
Segmentation Conditional Random Fields (SCRFs): A New Approach for Protein Fold Recognition
Abstract. Protein fold recognition is an important step towards understanding protein three-dimensional structures and their functions. A conditional graphical model, i.e. segmenta...
Yan Liu, Jaime G. Carbonell, Peter Weigele, Vanath...
108
Voted
RECOMB
2005
Springer
16 years 29 days ago
Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences
Abstract. In order to guarantee that the optimal motif is found, traditional pattern-driven approaches perform an exhaustive search over all candidate motifs of length l. We develo...
Sing-Hoi Sze, Xiaoyan Zhao
102
Voted
STOC
2005
ACM
164views Algorithms» more  STOC 2005»
16 years 29 days ago
Cooperative asynchronous update of shared memory
The Write-All problem for an asynchronous shared-memory system has the objective for the processes to update the contents of a set of shared registers, while minimizing the mber o...
Bogdan S. Chlebus, Dariusz R. Kowalski
VLDB
2006
ACM
171views Database» more  VLDB 2006»
16 years 26 days ago
Grid-partition index: a hybrid method for nearest-neighbor queries in wireless location-based services
Abstract Traditional nearest-neighbor (NN) search is based on two basic indexing approaches: object-based indexing and solution-based indexing. The former is constructed based on t...
Baihua Zheng, Jianliang Xu, Wang-Chien Lee, Dik Lu...
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