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156
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BMCBI
2007
15 years 5 months ago
2007
Background: Joint alignment and secondary structure prediction of two RNA sequences can significantly improve the accuracy of the structural predictions. Methods addressing this p...
111
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TCBB
2010
15 years 3 months ago
2010
— Analysis of conformational changes is one of the keys to the understanding of protein functions and interactions. For the analysis, we often compare two protein structures, tak...
148
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BMCBI
2006
15 years 5 months ago
2006
Background: gene identification in genomic DNA sequences by computational methods has become an important task in bioinformatics and computational gene prediction tools are now es...
140
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RECOMB
2004
Springer
16 years 5 months ago
2004
Springer
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
154
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RECOMB
2004
Springer
16 years 5 months ago
2004
Springer
In nature, one finds large collections of different protein sequences exhibiting roughly the same three-dimensional structure, and this observation underpins the study of structur...